Comino Cruise: Crystal Lagoon, Blue Lagoon, Santa Marija Bay

Setting out on a 4-hour cruise from Marfa Bay to Comino Island offers a delightful way to experience Malta’s most breathtaking seascapes. This journey takes you past some of the most iconic spots in the archipelago, with plenty of opportunities to swim, snorkel, and simply soak in the views. The guided trip is led by a friendly captain, giving it that personal touch that turns a simple boat ride into a memorable adventure.

What makes this experience stand out? First, I love the variety of stops—each one with its unique character. The Crystal Lagoon feels like stepping into a natural swimming pool, framed by dramatic cliffs and offering serene waters perfect for a quick splash or snorkel. The Blue Lagoon, on the other hand, is simply a postcard-worthy dream with its vivid turquoise waters—an ideal spot for lounging and taking photos. Lastly, Santa Marija Bay provides a quieter, less crowded escape with shallow, clear waters perfect for relaxing and exploring.

A potential consideration? The requirement to pre-book a government-issued access pass for Blue Lagoon disembarkation starting May 2025 might be an extra step, especially if you’re aiming to step ashore at the Blue Lagoon itself. It’s worth planning ahead and booking your pass well in advance via the official website to avoid any surprises.

This cruise balances scenic beauty with laid-back fun, making it a strong choice for travelers who want a taste of Malta’s famous waters without overloading on complexity or cost.

Key points / Takeaways

• Stunning scenery at every stop makes this a visual feast.
• Swim stops at the Crystal Lagoon and Blue Lagoon are perfect for cooling off and exploring underwater life.
• The Blue Lagoon’s transparent waters are ideal for relaxing or taking photos.
• The scenic cruise along Gozos rugged coast offers excellent photo opportunities of Marr Harbour.
• Santa Marija Bay provides a quieter, more relaxed spot to swim away from crowds.
• The tour includes amenities like freshwater showers and toilets, adding comfort after water-based activities.

The Itinerary: What to Expect on Your Day Out

When I read about trips like this, I like to break down what each part actually means for you. Starting from Marfa Bay, the journey is a scenic ride across the Mediterranean, giving you a chance to settle in and enjoy the breeze. The boat departs from a straightforward meeting point—look for a white boat named ‘The Blue Lagoon’—making it easy to find and get on with minimal fuss.

First Stop: The Crystal Lagoon

The first highlight is the Crystal Lagoon on the west coast of Comino. Known as one of the most exquisite and sheltered spots in Malta, it’s a site that draws both snorkelers and divers. Flanked by high cliffs, it feels like a secret hideaway, with turquoise waters that look almost too perfect to be real. Here, you’ll have about 45 minutes to swim or snorkel. The water’s clarity makes it a photographer’s dream, especially with the cliffs providing a dramatic backdrop.

Based on reviews, you’ll love the peacefulness and natural beauty. One traveler praised the friendly captain and the boat’s pleasant environment, emphasizing that the location exceeded expectations. The water is calm enough for a relaxing swim, and the scenic cliffs offer plenty of shade and photographic opportunities.

Second Stop: Blue Lagoon

Next, the cruise takes you to the famous Blue Lagoon, where you’ll anchor for approximately an hour. This is the most popular spot and for good reason—the waters are an incredibly vibrant shade of cyan blue, making it one of the most iconic sights in Malta. You can choose to swim, snorkel, or just lounge on the boat. Many travelers find it difficult to tear themselves away from the idyllic setting.

Note that disembarking ashore at the Blue Lagoon requires a government-issued access pass—booked in advance through the official site. This is a recent regulation, so be sure to plan ahead if you want to step onto the sands or explore the small island. Without the pass, you’ll remain on the boat, which still offers plenty of opportunities to relax and enjoy the scenery.

Scenic Gozzo Coastline & Marr Harbour

After Blue Lagoon, the cruise continues along the Gozitan coast, showcasing rugged cliffs and scenic coves. This part of the journey offers panoramic views of Marr Harbour, Gozos main port, and the surrounding landscape—perfect for snapping photos or just soaking in the natural beauty. The boat’s captain will likely point out interesting sights along the way.

Final Stop: Santa Marija Bay & Sea Caves

The last stop is Santa Marija Bay, a quieter, less frequented area ideal for a calm swim or snorkel. It’s a peaceful end to a busy morning of exploring. The Sea Caves nearby are natural masterpieces, carved into the coast by the sea’s persistent work over millennia, offering unique photo opportunities and a sense of untouched wildness.

Returning to Marfa Bay

After about four hours of swimming, sightseeing, and relaxing, the boat returns to the original meeting point. Most travelers report feeling satisfied but also wishing the trip could last a little longer—highlighting its excellent value for the price.

The Practical Side: What’s Included, What’s Not

The tour’s value is quite good considering the experience. It includes all the scenic cruise, stops at three key locations, and amenities like freshwater showers and toilets. You’ll want to bring your own sunscreen, swimwear, towel, hat, and sunglasses, as well as comfortable shoes for walking ashore if you plan to disembark at the Blue Lagoon (after securing your pass).

What’s not included? The government-issued access pass for Blue Lagoon disembarkation must be booked separately—this is a recent government regulation. Also, the cruise does not include food or drinks, so bring a water bottle or snacks if you like. No hotel pickup or guided commentary is provided, but the captain’s friendly attitude and scenic narration often make up for that.

Who This Tour Is Perfect For

This cruise appeals most to travelers seeking a relaxed, scenic day on the water. It’s ideal if you love beautiful beaches, crystal-clear waters, and photo-worthy landscapes. Families, couples, and solo travelers alike will find it a comfortable, enjoyable outing.

It’s also suited for those who appreciate not overcomplicating their itinerary—the stops are well-paced, and the boat’s amenities keep things comfortable. However, if you have mobility issues or are prone to seasickness, this might not be the best fit, as the boat does not cater specifically to those needs.

Price and Logistics: What Matters

For around 4 hours, the cost offers solid value—you get three swim stops, scenic views, and a friendly guide. The main logistical consideration is the Blue Lagoon pass, which requires planning ahead. The meeting point is straightforward, at Marfa Jetty, and there’s no need for complicated transportation arrangements.

The cruise’s timing varies, so check availability and start times in advance. The activity is not suitable for large luggage or unaccompanied minors, and pets are not allowed, making it clear and simple.

The Sum Up: Who Should Book This Experience?

If you’re after a relaxed day of swimming and sightseeing, this cruise hits the spot. It’s perfect for those who want to see Malta’s famous waters without fuss, enjoying the stunning scenery and pristine waters at a leisurely pace. The stops at Crystal Lagoon and Blue Lagoon are unforgettable, and the quiet Santa Marija Bay offers a peaceful wrap-up.

Travelers who appreciate authentic natural beauty and want plenty of photo opportunities will find it a worthwhile splurge. It’s also an excellent way to escape the crowds at Blue Lagoon, especially if you plan ahead with the government pass.

This experience offers a balanced mix of adventure, relaxation, and scenic beauty, making it a highlight for many visitors to Malta.

FAQ

Do I need to book the Blue Lagoon disembarkation pass in advance? Yes, starting May 2025, you’ll need to secure an access pass through the official website to step ashore at the Blue Lagoon. It’s recommended to book the morning slot as the daily allocation is limited.

What is included in the tour? The cruise includes the scenic boat ride, swim stops at Crystal Lagoon, Blue Lagoon, and Santa Marija Bay, as well as freshwater showers and toilet facilities onboard.

Can I bring food or drinks? No, food and drinks are not included, so you should bring your own water, snacks, sunscreen, and a towel.

Is the tour suitable for children or people with mobility issues? It’s best suited for those who are comfortable on boats and in the water. It’s not recommended for those with mobility impairments or unaccompanied minors.

How long is each stop? The Crystal Lagoon stop is approximately 45 minutes, the Blue Lagoon around one hour, and Santa Marija Bay’s time is flexible depending on the group.

What happens if the weather is bad? The provider reserves the right to change the itinerary or duration depending on weather conditions, but the cruise typically proceeds unless safety is a concern.

This Comino cruise offers an inviting, scenic escape into Malta’s most famous waters, balancing natural beauty with relaxed fun. Whether you’re snapping photos of the Blue Lagoon’s crystal waters or enjoying the peace of Santa Marija Bay, this is a trip that can linger in your memory long after you leave Malta.